Merge pull request #3 from CESNET/create-pull-request/patch

Update all tools of galaxy-qa1.galaxy.cloud.e-infra.cz

Author: martenson

galaxy-qa1.galaxy.cloud.e-infra.cz/annotation.yml.lock

@@ -36,6 +36,7 @@ tools:
   owner: nml
   revisions:
   - 93ba63eaf394
+  - '179497074102'
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: antismash
@@ -162,6 +163,7 @@ tools:
   owner: devteam
   revisions:
   - 9cd341095afd
+  - aff5135563c6
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: socru
@@ -198,6 +200,7 @@ tools:
   owner: rnateam
   revisions:
   - eb35257d2e29
+  - 10b84b577117
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: spaln
@@ -234,6 +237,7 @@ tools:
   owner: iuc
   revisions:
   - 0ba7dfaa941d
+  - 8e2ac1b8f70a
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: trna_prediction
@@ -259,18 +263,21 @@ tools:
   owner: genouest
   revisions:
   - ca7c12566894
+  - f432bb944473
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: probmetab
   owner: mmonsoor
   revisions:
   - 3a9914b37f2f
+  - 52b222a626b0
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: lcmsmatching
   owner: prog
   revisions:
   - 253d531a0193
+  - f86fec07f392
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: dotknot
@@ -289,6 +296,7 @@ tools:
   owner: rnateam
   revisions:
   - 6845ddcd5588
+  - c172fed9eb75
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: cryptogenotyper

galaxy-qa1.galaxy.cloud.e-infra.cz/assembly.yml.lock

@@ -18,6 +18,7 @@ tools:
   owner: iuc
   revisions:
   - 06bcf65179fb
+  - ba88bc5a6446
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: mitohifi
@@ -42,24 +43,28 @@ tools:
   owner: iuc
   revisions:
   - 1b52f0c8ad7f
+  - d6c074a93c51
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: aegean_locuspocus
   owner: iuc
   revisions:
   - c4ac24510b55
+  - 1fdc517743e6
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: aegean_gaeval
   owner: iuc
   revisions:
   - 1dd7adc21b6d
+  - 8dc7512c9dc9
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: aegean_canongff3
   owner: iuc
   revisions:
   - 3f438bf5475d
+  - c45c9dd066e2
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: shasta
@@ -102,6 +107,7 @@ tools:
   owner: simon-gladman
   revisions:
   - 37d88f41c810
+  - 82398ba86ba7
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: pilon
@@ -150,6 +156,7 @@ tools:
   owner: bgruening
   revisions:
   - db0f5c1cb227
+  - 13999e95b2d3
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: minced
@@ -198,6 +205,7 @@ tools:
   owner: bgruening
   revisions:
   - 5799092ffdff
+  - 0393c0415171
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: velvet
@@ -210,6 +218,7 @@ tools:
   owner: artbio
   revisions:
   - d76a0d8a9eac
+  - a36a1acd5807
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: minipolish

galaxy-qa1.galaxy.cloud.e-infra.cz/bed.yml.lock

@@ -7,6 +7,7 @@ tools:
   revisions:
   - b8348686a0b9
   - dde39ba9c031
+  - 2892111d91f8
   tool_panel_section_id: bed
   tool_panel_section_label: BED
 - name: bedops_sortbed

galaxy-qa1.galaxy.cloud.e-infra.cz/chemicaltoolbox.yml.lock

@@ -168,6 +168,7 @@ tools:
   owner: chemteam
   revisions:
   - 0f17d0720565
+  - 49076afc90b1
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: mdanalysis_angle
@@ -180,12 +181,14 @@ tools:
   owner: earlhaminst
   revisions:
   - 451f90534945
+  - da07fb6a7c62
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: smina
   owner: earlhaminst
   revisions:
   - 7c0bb0c48a27
+  - 214e001014f7
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: autodock_vina_prepare_receptor
@@ -300,18 +303,21 @@ tools:
   owner: bgruening
   revisions:
   - 7fac8e7a12d5
+  - 0848d3b1a46f
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: rxdock_rbdock
   owner: bgruening
   revisions:
   - 6fe6b0e10ed6
+  - b34d068c2782
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: rxdock_sort_filter
   owner: bgruening
   revisions:
   - 4ba7350f00ad
+  - 3e4244e74d41
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: ctb_im_pbf_ev
@@ -420,6 +426,7 @@ tools:
   owner: bgruening
   revisions:
   - 73de2fe4bf92
+  - 3b14765c22ee
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: md_converter
@@ -541,12 +548,14 @@ tools:
   owner: bgruening
   revisions:
   - 0892f7ced10c
+  - 425469deb136
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: confab
   owner: bgruening
   revisions:
   - 119b462f0f69
+  - 461f64330945
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: ctb_machine_learning
@@ -565,12 +574,14 @@ tools:
   owner: bgruening
   revisions:
   - 8d2b075966d6
+  - 473a07404e83
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: gmx_md
   owner: chemteam
   revisions:
   - 609d93596b61
+  - 2e28934c1d8c
   tool_panel_section_id: chemicaltoolbox
   tool_panel_section_label: ChemicalToolBox
 - name: align_it

galaxy-qa1.galaxy.cloud.e-infra.cz/collection_operations.yml.lock

@@ -12,6 +12,7 @@ tools:
   owner: bgruening
   revisions:
   - 37a53100b67e
+  - ff2a81aa3f08
   tool_panel_section_id: collection_operations
   tool_panel_section_label: Collection Operations
 - name: collapse_collections

galaxy-qa1.galaxy.cloud.e-infra.cz/convert_formats.yml.lock

@@ -6,6 +6,7 @@ tools:
   owner: bgruening
   revisions:
   - 6d8444408ff1
+  - d6ede73082da
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
 - name: 10x_bamtofastq
@@ -18,24 +19,28 @@ tools:
   owner: bgruening
   revisions:
   - 891b330ffd94
+  - 3d71ab1562d7
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
 - name: tabular_to_fasta
   owner: devteam
   revisions:
   - 0b4e36026794
+  - 0a7799698fe5
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
 - name: fasta_to_tabular
   owner: devteam
   revisions:
   - 7e801ab2b70e
+  - e7ed3c310b74
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
 - name: tabular_to_fastq
   owner: devteam
   revisions:
   - 92034dcbb40a
+  - 78fb18899c99
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
 - name: gfa_to_fa
@@ -54,6 +59,7 @@ tools:
   owner: galaxyp
   revisions:
   - dd4ba10d0c45
+  - ab6c14374bc0
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
 - name: interval2maf
@@ -114,6 +120,7 @@ tools:
   owner: galaxyp
   revisions:
   - 9e6e840d6b52
+  - edb33e8224c6
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
 - name: gtftobed12

galaxy-qa1.galaxy.cloud.e-infra.cz/deeptools.yml.lock

@@ -6,6 +6,7 @@ tools:
   owner: bgruening
   revisions:
   - c7bed3fe0e23
+  - 2107c2f7a5d7
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_bam_compare

galaxy-qa1.galaxy.cloud.e-infra.cz/fasta_fastq.yml.lock

@@ -36,6 +36,7 @@ tools:
   owner: devteam
   revisions:
   - 2ccb8dcabddc
+  - b41c2c1bcfbf
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: fasta_filter_by_length
@@ -60,12 +61,14 @@ tools:
   owner: bgruening
   revisions:
   - cd7e644cae1d
+  - eefb644655a5
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: sickle
   owner: iuc
   revisions:
   - 6756c87dc2d4
+  - 9108bd9450cb
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: flash
@@ -90,6 +93,7 @@ tools:
   owner: iuc
   revisions:
   - 66d1f96c5600
+  - 12a5e6fa850e
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: atactk_trim_adapters
@@ -102,36 +106,42 @@ tools:
   owner: iuc
   revisions:
   - b43c26de8701
+  - 4f4c5a4dda59
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: bctools_extract_barcodes
   owner: iuc
   revisions:
   - fb83859f7714
+  - ceb779d5be5b
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: bctools_extract_alignment_ends
   owner: iuc
   revisions:
   - 6d41997eabdc
+  - 0be29a221b16
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: bctools_merge_pcr_duplicates
   owner: iuc
   revisions:
   - 2cbc4dd55cd8
+  - 04e67d8245fe
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: bctools_remove_spurious_events
   owner: iuc
   revisions:
   - 3175047fb607
+  - 308ab6387c75
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: bctools_remove_tail
   owner: iuc
   revisions:
   - 3c581a2b19f3
+  - 6979701451c3
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: je_clip
@@ -174,12 +184,14 @@ tools:
   owner: lparsons
   revisions:
   - b007d9642911
+  - 8ec3dfde378b
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: splitfasta
   owner: rnateam
   revisions:
   - ae4d5733272f
+  - 7521d865e770
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: rcorrector

galaxy-qa1.galaxy.cloud.e-infra.cz/fetch_alignments_sequences.yml.lock

@@ -6,6 +6,7 @@ tools:
   owner: iuc
   revisions:
   - f088370d2a3c
+  - e3ba567abdf5
   tool_panel_section_id: fetch_alignments_sequences
   tool_panel_section_label: Fetch Alignments/Sequences
 - name: fraggenescan
@@ -18,5 +19,6 @@ tools:
   owner: iuc
   revisions:
   - 642d73815dd1
+  - 54e818ea7c4d
   tool_panel_section_id: fetch_alignments_sequences
   tool_panel_section_label: Fetch Alignments/Sequences