PROBEst/.gitignore at main · CTLab-ITMO/PROBEst · GitHub

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data/test/general/
data/test/grid/fasta_base
data/test/grid/blastn_base
data/test/grid/output
data/test/grid/contigs
data/test/grid2
data/param_search
src/PROBESt/__pycache__
tests/PROBESt/__pycache__
tests_outs/
tests_out/
test_outs/
test_out/
test_download/
data/databases/open/probeBase_false_formatted.csv
data/databases/open/probeBase_false_genome_results.csv
data/databases/open/probeBase_formatted.csv
data/databases/open/probeBase_formamide.tsv
data/databases/open/probeBase_genome_results.csv
data/databases/open/test_ML_database_tokenized.csv
genome_parse_results.csv
data/genomes/
data/articles2/
benchmark*
OligoMiner

# Python
__pycache__/
*.py[cod]
*$py.class
*.so
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
*.egg-info/
.installed.cfg
*.egg

# Virtual Environment
venv/
env/
ENV/

# IDE
.idea/
.vscode/
*.swp
*.swo

# Testing
.pytest_cache/
.coverage
htmlcov/
.tox/

# Distribution
*.tar.gz
*.zip

# Logs
*.log

# Local development
*.xml
*.fasta
*.fna
*.faa
*.out
*gz
scripts/loop_generation/
PROBEst.Rproj
.Rproj.user
.Rhistory
articles.tar.bz2
data/databases/articles/artificial_database_structure
data/databases/articles/unvalidated.txt
scripts/databases/combine_databases.py