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Only support SELECTED_ELECTRODES, not SELECTED_CHANNELS
1 parent feaa386 commit c52aee1

6 files changed

Lines changed: 7 additions & 7 deletions

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src/probeinterface/neuropixels_tools.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -869,7 +869,7 @@ def read_openephys(
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dock = np_probe.attrib.get("dock")
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probe_part_number = np_probe.attrib.get("probe_part_number") or np_probe.attrib.get("probePartNumber")
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probe_serial_number = np_probe.attrib.get("probe_serial_number") or np_probe.attrib.get("probeSerialNumber")
872-
selected_electrodes = np_probe.find("SELECTED_ELECTRODES") or np_probe.find("SELECTED_CHANNELS")
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selected_electrodes = np_probe.find("SELECTED_ELECTRODES")
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channels = np_probe.find("CHANNELS")
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pt_metadata, _, mux_info = get_probe_metadata_from_probe_features(probe_features, probe_part_number)

tests/data/openephys/OE_ONIX-NP/settings_NP2.xml

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -59,7 +59,7 @@
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flexVersion="0.1" searchForCorrectionFiles="1" gainCorrectionFolder="C:\Users\anjal.doshi\Desktop\23176523171"
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gainCorrectionFile="C:\Users\anjal.doshi\Desktop\23176523171\23176523171_gainCalValues.csv">
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<PROBE_VIEWER zoomHeight="80" zoomOffset="110" referenceChannel="Ext"/>
62-
<SELECTED_CHANNELS CH0="768" CH1="769" CH2="770" CH3="771" CH4="772" CH5="773" CH6="774"
62+
<SELECTED_ELECTRODES CH0="768" CH1="769" CH2="770" CH3="771" CH4="772" CH5="773" CH6="774"
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CH7="775" CH8="776" CH9="777" CH10="778" CH11="779" CH12="780"
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CH13="781" CH14="782" CH15="783" CH16="784" CH17="785" CH18="786"
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CH19="787" CH20="788" CH21="789" CH22="790" CH23="791" CH24="792"
@@ -132,7 +132,7 @@
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flexVersion="0.1" searchForCorrectionFiles="1" gainCorrectionFolder="C:\Users\anjal.doshi\Desktop\12345601013"
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gainCorrectionFile="C:\Users\anjal.doshi\Desktop\12345601013\12345601013_gainCalValues.csv">
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<PROBE_VIEWER zoomHeight="80" zoomOffset="432" referenceChannel="Ext"/>
135-
<SELECTED_CHANNELS CH0="384" CH1="385" CH2="386" CH3="387" CH4="388" CH5="389" CH6="390"
135+
<SELECTED_ELECTRODES CH0="384" CH1="385" CH2="386" CH3="387" CH4="388" CH5="389" CH6="390"
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CH7="391" CH8="392" CH9="393" CH10="394" CH11="395" CH12="396"
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CH13="397" CH14="398" CH15="399" CH16="400" CH17="401" CH18="402"
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CH19="403" CH20="404" CH21="405" CH22="406" CH23="407" CH24="408"

tests/data/openephys/OE_ONIX-NP/settings_bankA.xml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -60,7 +60,7 @@
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gainCalibrationFile="C:\Brandon-temp\19051024281\19051024281_gainCalValues.csv">
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<PROBE_VIEWER zoomHeight="100" zoomOffset="66" apGain="1000x" lfpGain="50x"
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referenceChannel="Ext" apFilter="OFF"/>
63-
<SELECTED_CHANNELS CH0="0" CH1="1" CH2="2" CH3="3" CH4="4" CH5="5" CH6="6" CH7="7"
63+
<SELECTED_ELECTRODES CH0="0" CH1="1" CH2="2" CH3="3" CH4="4" CH5="5" CH6="6" CH7="7"
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CH8="8" CH9="9" CH10="10" CH11="11" CH12="12" CH13="13" CH14="14"
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CH15="15" CH16="16" CH17="17" CH18="18" CH19="19" CH20="20" CH21="21"
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CH22="22" CH23="23" CH24="24" CH25="25" CH26="26" CH27="27" CH28="28"

tests/data/openephys/OE_ONIX-NP/settings_bankB.xml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -60,7 +60,7 @@
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gainCalibrationFile="C:\Brandon-temp\19051024281\19051024281_gainCalValues.csv">
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<PROBE_VIEWER zoomHeight="100" zoomOffset="360" apGain="1000x" lfpGain="50x"
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referenceChannel="Ext" apFilter="ON"/>
63-
<SELECTED_CHANNELS CH0="384" CH1="385" CH2="386" CH3="387" CH4="388" CH5="389" CH6="390"
63+
<SELECTED_ELECTRODES CH0="384" CH1="385" CH2="386" CH3="387" CH4="388" CH5="389" CH6="390"
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CH7="391" CH8="392" CH9="393" CH10="394" CH11="395" CH12="396"
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CH13="397" CH14="398" CH15="399" CH16="400" CH17="401" CH18="402"
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CH19="403" CH20="404" CH21="405" CH22="406" CH23="407" CH24="408"

tests/data/openephys/OE_ONIX-NP/settings_bankC.xml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -60,7 +60,7 @@
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gainCalibrationFile="C:\Brandon-temp\19051024281\19051024281_gainCalValues.csv">
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<PROBE_VIEWER zoomHeight="100" zoomOffset="360" apGain="1000x" lfpGain="50x"
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referenceChannel="Ext" apFilter="ON"/>
63-
<SELECTED_CHANNELS CH0="768" CH1="769" CH2="770" CH3="771" CH4="772" CH5="773" CH6="774"
63+
<SELECTED_ELECTRODES CH0="768" CH1="769" CH2="770" CH3="771" CH4="772" CH5="773" CH6="774"
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CH7="775" CH8="776" CH9="777" CH10="778" CH11="779" CH12="780"
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CH13="781" CH14="782" CH15="783" CH16="784" CH17="785" CH18="786"
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CH19="787" CH20="788" CH21="789" CH22="790" CH23="791" CH24="792"

tests/data/openephys/OE_ONIX-NP/settings_tetrodes.xml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -60,7 +60,7 @@
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gainCalibrationFile="C:\Brandon-temp\19051024281\19051024281_gainCalValues.csv">
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<PROBE_VIEWER zoomHeight="100" zoomOffset="360" apGain="1000x" lfpGain="50x"
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referenceChannel="Ext" apFilter="ON"/>
63-
<SELECTED_CHANNELS CH0="0" CH1="1" CH2="2" CH3="3" CH4="388" CH5="389" CH6="390"
63+
<SELECTED_ELECTRODES CH0="0" CH1="1" CH2="2" CH3="3" CH4="388" CH5="389" CH6="390"
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CH7="391" CH8="8" CH9="9" CH10="10" CH11="11" CH12="396" CH13="397"
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CH14="398" CH15="399" CH16="16" CH17="17" CH18="18" CH19="19"
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CH20="404" CH21="405" CH22="406" CH23="407" CH24="24" CH25="25"

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