New docker build for TDC with the numpy/numba/hdbscan mess

Author: samuelgarcia

tridesclous/Dockerfile

@@ -3,12 +3,19 @@ FROM python:3.8
 # downgrade pip version to avoid dependency issues during installations
 RUN pip install --no-input pip==21.2.4
 
-RUN pip install numpy
+
 
 # Install prerequisites
 RUN apt-get update && apt-get install -y libgl1-mesa-glx
+
+# need to force some version
+RUN pip install numpy==1.20
+RUN pip install numba
+RUN pip install git+https://github.com/scikit-learn-contrib/hdbscan.git
+
+
 RUN pip install Cython
-RUN pip install scipy numpy pandas scikit-learn matplotlib seaborn tqdm openpyxl quantities neo numba hdbscan
+RUN pip install scipy pandas scikit-learn matplotlib seaborn tqdm openpyxl quantities neo
 RUN pip install h5py
 RUN pip install loky