Merge remote-tracking branch 'SpikeInterface/main' into pykilosort

vncntprvst · vncntprvst · commit 75d8fb166aa3 · 2022-06-14T17:39:09.000-04:00
diff --git a/ironclust-compiled/build.sh b/ironclust-compiled/build.sh
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-docker build -t spikeinterface/ironclust-compiled-base:5.9.8 .
+docker build -t spikeinterface/ironclust-compiled-base:latest -t spikeinterface/ironclust-compiled-base:5.9.8 .
 
diff --git a/ironclust-compiled/push.sh b/ironclust-compiled/push.sh
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-docker push spikeinterface/ironclust-compiled-base:5.9.8
+docker push --all-tags spikeinterface/ironclust-compiled-base
 
diff --git a/kilosort_no_license/kilosort-compiled/build.sh b/kilosort_no_license/kilosort-compiled/build.sh
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-docker build -t spikeinterface/kilosort-compiled-base:0.1.0 .
+docker build -t spikeinterface/kilosort-compiled-base:latest -t spikeinterface/kilosort-compiled-base:0.1.0 .
 
diff --git a/kilosort_no_license/kilosort-compiled/push.sh b/kilosort_no_license/kilosort-compiled/push.sh
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-docker push spikeinterface/kilosort-compiled-base:0.1.0
+docker push --all-tags spikeinterface/kilosort-compiled-base
 
diff --git a/kilosort_no_license/kilosort2-compiled/build.sh b/kilosort_no_license/kilosort2-compiled/build.sh
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-docker build -t spikeinterface/kilosort2-compiled-base:0.1.0 .
+docker build -t spikeinterface/kilosort2-compiled-base:latest -t spikeinterface/kilosort2-compiled-base:0.1.0 .
 
diff --git a/kilosort_no_license/kilosort2-compiled/push.sh b/kilosort_no_license/kilosort2-compiled/push.sh
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-docker push spikeinterface/kilosort2-compiled-base:0.1.0
+docker push --all-tags spikeinterface/kilosort2-compiled-base
 
diff --git a/kilosort_no_license/kilosort2_5-compiled/build.sh b/kilosort_no_license/kilosort2_5-compiled/build.sh
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-docker build -t spikeinterface/kilosort2_5-compiled-base:0.1.0 .
+docker build -t spikeinterface/kilosort2_5-compiled-base:latest -t spikeinterface/kilosort2_5-compiled-base:0.1.0 .
 
diff --git a/kilosort_no_license/kilosort2_5-compiled/push.sh b/kilosort_no_license/kilosort2_5-compiled/push.sh
@@ -1,4 +1,4 @@
 #!/bin/bash
 
-docker push spikeinterface/kilosort2_5-compiled-base:0.1.0
+docker push --all-tags spikeinterface/kilosort2_5-compiled-base
 
diff --git a/kilosort_no_license/kilosort3-compiled/build.sh b/kilosort_no_license/kilosort3-compiled/build.sh
@@ -1,4 +1,3 @@
 #!/bin/bash
 
-docker build -t spikeinterface/kilosort3-compiled-base:0.1.0 . -f Dockerfile
-
+docker build -t spikeinterface/kilosort3-compiled-base:latest -t spikeinterface/kilosort3-compiled-base:0.1.0 . -f Dockerfile
diff --git a/kilosort_no_license/kilosort3-compiled/push.sh b/kilosort_no_license/kilosort3-compiled/push.sh
@@ -1,4 +1,3 @@
 #!/bin/bash
 
-docker push spikeinterface/kilosort3-compiled-base:0.1.0
-
+docker image push --all-tags spikeinterface/kilosort3-compiled-base
diff --git a/klusta/build.sh b/klusta/build.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker build -t spikeinterface/klusta-base:0.2.7 .
+docker build -t spikeinterface/klusta-base:latest -t spikeinterface/klusta-base:0.2.7 .
diff --git a/klusta/push.sh b/klusta/push.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker push spikeinterface/klusta-base:0.2.7
+docker push --all-tags spikeinterface/klusta-base
diff --git a/mountainsort4/Dockerfile b/mountainsort4/Dockerfile
@@ -5,5 +5,6 @@ RUN pip install --no-input pip==21.2.4
 
 RUN pip install numpy
 
+RUN pip install requests
 # Install MountainSort4
 RUN pip install mountainsort4==1.0.0
diff --git a/mountainsort4/build.sh b/mountainsort4/build.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker build -t spikeinterface/mountainsort4-base:1.0.0 .
+docker build -t spikeinterface/mountainsort4-base:latest -t spikeinterface/mountainsort4-base:1.0.0 .
diff --git a/mountainsort4/push.sh b/mountainsort4/push.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker push spikeinterface/mountainsort4-base:1.0.0
+docker push --all-tags spikeinterface/mountainsort4-base
diff --git a/spikeinterface-jupyterlab/build.sh b/spikeinterface-jupyterlab/build.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker build -t spikeinterface/spikeinterface-jupyterlab:0.2 .
+docker build -t spikeinterface/spikeinterface-jupyterlab:latest -t spikeinterface/spikeinterface-jupyterlab:0.2 .
diff --git a/spikeinterface-jupyterlab/push.sh b/spikeinterface-jupyterlab/push.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker push spikeinterface/spikeinterface-jupyterlab:0.2
+docker push --all-tags spikeinterface/spikeinterface-jupyterlab
diff --git a/spykingcircus/build.sh b/spykingcircus/build.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker build -t spikeinterface/spyking-circus-base:1.1.0 .
+docker build -t spikeinterface/spyking-circus-base:latest -t spikeinterface/spyking-circus-base:1.1.0 .
diff --git a/spykingcircus/push.sh b/spykingcircus/push.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker push spikeinterface/spyking-circus-base:1.1.0
+docker push --all-tags spikeinterface/spyking-circus-base
diff --git a/tridesclous/build.sh b/tridesclous/build.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker build -t spikeinterface/tridesclous-base:1.6.5 .
+docker build -t spikeinterface/tridesclous-base:latest -t spikeinterface/tridesclous-base:1.6.5 .
diff --git a/tridesclous/push.sh b/tridesclous/push.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker push spikeinterface/tridesclous-base:1.6.5
+docker push --all-tags spikeinterface/tridesclous-base
diff --git a/yass/build.sh b/yass/build.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker build -t spikeinterface/yass-base:2.0.0 .
+docker build -t spikeinterface/yass-base:latest -t spikeinterface/yass-base:2.0.0 .
diff --git a/yass/push.sh b/yass/push.sh
@@ -1,3 +1,3 @@
 #!/bin/bash
 
-docker push spikeinterface/yass-base:2.0.0
+docker push --all-tags spikeinterface/yass-base

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`	`1`	`#!/bin/bash`
`2`	`2`
`3`		`-docker build -t spikeinterface/ironclust-compiled-base:5.9.8 .`
	`3`	`+docker build -t spikeinterface/ironclust-compiled-base:latest -t spikeinterface/ironclust-compiled-base:5.9.8 .`
`4`	`4`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`	`1`	`#!/bin/bash`
`2`	`2`
`3`		`-docker push spikeinterface/ironclust-compiled-base:5.9.8`
	`3`	`+docker push --all-tags spikeinterface/ironclust-compiled-base`
`4`	`4`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`	`1`	`#!/bin/bash`
`2`	`2`
`3`		`-docker build -t spikeinterface/kilosort-compiled-base:0.1.0 .`
	`3`	`+docker build -t spikeinterface/kilosort-compiled-base:latest -t spikeinterface/kilosort-compiled-base:0.1.0 .`
`4`	`4`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`	`1`	`#!/bin/bash`
`2`	`2`
`3`		`-docker push spikeinterface/kilosort-compiled-base:0.1.0`
	`3`	`+docker push --all-tags spikeinterface/kilosort-compiled-base`
`4`	`4`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`	`1`	`#!/bin/bash`
`2`	`2`
`3`		`-docker push spikeinterface/kilosort2-compiled-base:0.1.0`
	`3`	`+docker push --all-tags spikeinterface/kilosort2-compiled-base`
`4`	`4`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`	`1`	`#!/bin/bash`
`2`	`2`
`3`		`-docker push spikeinterface/kilosort2_5-compiled-base:0.1.0`
	`3`	`+docker push --all-tags spikeinterface/kilosort2_5-compiled-base`
`4`	`4`