rearrange table of contents

Section 3 of Chapter IV was completely reorganized.

Author: JoramSoch

D/cvlme.md

@@ -10,7 +10,7 @@ date: 2020-11-19 04:55:00
 title: "Cross-validated log model evidence"
 chapter: "Model Selection"
 section: "Bayesian model selection"
-topic: "Log model evidence"
+topic: "Model evidence"
 definition: "Cross-validated log model evidence"
 
 sources:

D/eblme.md

@@ -10,7 +10,7 @@ date: 2020-11-25 07:43:00
 title: "Empirical Bayesian log model evidence"
 chapter: "Model Selection"
 section: "Bayesian model selection"
-topic: "Log model evidence"
+topic: "Model evidence"
 definition: "Empirical Bayesian log model evidence"
 
 sources:

D/lbf.md

@@ -10,8 +10,8 @@ date: 2020-07-22 07:02:00
 title: "Log Bayes factor"
 chapter: "Model Selection"
 section: "Bayesian model selection"
-topic: "Log Bayes factor"
-definition: "Definition"
+topic: "Bayes factor"
+definition: "Log Bayes factor"
 
 sources:
   - authors: "Soch J, Allefeld C"

D/lfe.md

@@ -10,8 +10,8 @@ date: 2020-07-13 22:31:00
 title: "Log family evidence"
 chapter: "Model Selection"
 section: "Bayesian model selection"
-topic: "Log family evidence"
-definition: "Definition"
+topic: "Family evidence"
+definition: "Log family evidence"
 
 sources:
   - authors: "Soch J, Allefeld C"

D/lme.md

@@ -10,8 +10,8 @@ date: 2020-02-25 12:56:00
 title: "Log model evidence"
 chapter: "Model Selection"
 section: "Bayesian model selection"
-topic: "Log model evidence"
-definition: "Definition"
+topic: "Model evidence"
+definition: "Log model evidence"
 
 sources:
   - authors: "Soch J, Allefeld C"

D/uplme.md

@@ -10,7 +10,7 @@ date: 2020-11-25 07:28:00
 title: "Uniform-prior log model evidence"
 chapter: "Model Selection"
 section: "Bayesian model selection"
-topic: "Log model evidence"
+topic: "Model evidence"
 definition: "Uniform-prior log model evidence"
 
 sources:

D/vblme.md

@@ -10,7 +10,7 @@ date: 2020-11-25 08:10:00
 title: "Variational Bayesian log model evidence"
 chapter: "Model Selection"
 section: "Bayesian model selection"
-topic: "Log model evidence"
+topic: "Model evidence"
 definition: "Variational Bayesian log model evidence"
 
 sources:

I/ToC.md

@@ -737,46 +737,40 @@ title: "Table of Contents"
    3.1. Model evidence <br>
    &emsp;&ensp; 3.1.1. *[Definition](/D/me)* <br>
    &emsp;&ensp; 3.1.2. **[Derivation](/P/me-der)** <br>
-   
-   3.2. Log model evidence <br>
-   &emsp;&ensp; 3.2.1. *[Definition](/D/lme)* <br>
-   &emsp;&ensp; 3.2.2. **[Derivation](/P/lme-der)** <br>
-   &emsp;&ensp; 3.2.3. **[Expression using prior and posterior](/P/lme-pnp)** <br>
-   &emsp;&ensp; 3.2.4. **[Partition into accuracy and complexity](/P/lme-anc)** <br>
-   &emsp;&ensp; 3.2.5. *[Uniform-prior log model evidence](/D/uplme)* <br>
-   &emsp;&ensp; 3.2.6. *[Cross-validated log model evidence](/D/cvlme)* <br>
-   &emsp;&ensp; 3.2.7. *[Empirical Bayesian log model evidence](/D/eblme)* <br>
-   &emsp;&ensp; 3.2.8. *[Variational Bayesian log model evidence](/D/vblme)* <br>
-   
-   3.3. Family evidence <br>
-   &emsp;&ensp; 3.3.1. *[Definition](/D/fe)* <br>
-   &emsp;&ensp; 3.3.2. **[Derivation](/P/fe-der)** <br>
-   
-   3.4. Log family evidence <br>
-   &emsp;&ensp; 3.4.1. *[Definition](/D/lfe)* <br>
-   &emsp;&ensp; 3.4.2. **[Derivation](/P/lfe-der)** <br>
-   &emsp;&ensp; 3.4.3. **[Calculation from log model evidences](/P/lfe-lme)** <br>
-   
-   3.5. Bayes factor <br>
-   &emsp;&ensp; 3.5.1. *[Definition](/D/bf)* <br>
-   &emsp;&ensp; 3.5.2. **[Transitivity](/P/bf-trans)** <br>
-   &emsp;&ensp; 3.5.3. **[Computation using Savage-Dickey Density Ratio](/P/bf-sddr)** <br>
-   &emsp;&ensp; 3.5.4. **[Computation using Encompassing Prior Method](/P/bf-ep)** <br>
-   &emsp;&ensp; 3.5.5. *[Encompassing model](/D/encm)* <br>
-   
-   3.6. Log Bayes factor <br>
-   &emsp;&ensp; 3.6.1. *[Definition](/D/lbf)* <br>
-   &emsp;&ensp; 3.6.2. **[Derivation](/P/lbf-der)** <br>
-   &emsp;&ensp; 3.6.3. **[Calculation from log model evidences](/P/lbf-lme)** <br>
-   
-   3.7. Posterior model probability <br>
-   &emsp;&ensp; 3.7.1. *[Definition](/D/pmp)* <br>
-   &emsp;&ensp; 3.7.2. **[Derivation](/P/pmp-der)** <br>
-   &emsp;&ensp; 3.7.3. **[Calculation from Bayes factors](/P/pmp-bf)** <br>
-   &emsp;&ensp; 3.7.4. **[Calculation from log Bayes factor](/P/pmp-lbf)** <br>
-   &emsp;&ensp; 3.7.5. **[Calculation from log model evidences](/P/pmp-lme)** <br>
-   
-   3.8. Bayesian model averaging <br>
-   &emsp;&ensp; 3.8.1. *[Definition](/D/bma)* <br>
-   &emsp;&ensp; 3.8.2. **[Derivation](/P/bma-der)** <br>
-   &emsp;&ensp; 3.8.3. **[Calculation from log model evidences](/P/bma-lme)** <br>
+   &emsp;&ensp; 3.1.3. *[Log model evidence](/D/lme)* <br>
+   &emsp;&ensp; 3.1.4. **[Derivation of the LME](/P/lme-der)** <br>
+   &emsp;&ensp; 3.1.5. **[Expression using prior and posterior](/P/lme-pnp)** <br>
+   &emsp;&ensp; 3.1.6. **[Partition into accuracy and complexity](/P/lme-anc)** <br>
+   &emsp;&ensp; 3.1.7. *[Uniform-prior log model evidence](/D/uplme)* <br>
+   &emsp;&ensp; 3.1.8. *[Cross-validated log model evidence](/D/cvlme)* <br>
+   &emsp;&ensp; 3.1.9. *[Empirical Bayesian log model evidence](/D/eblme)* <br>
+   &emsp;&ensp; 3.1.10. *[Variational Bayesian log model evidence](/D/vblme)* <br>
+   
+   3.2. Family evidence <br>
+   &emsp;&ensp; 3.2.1. *[Definition](/D/fe)* <br>
+   &emsp;&ensp; 3.2.2. **[Derivation](/P/fe-der)** <br>
+   &emsp;&ensp; 3.2.3. *[Log family evidence](/D/lfe)* <br>
+   &emsp;&ensp; 3.2.4. **[Derivation of the LFE](/P/lfe-der)** <br>
+   &emsp;&ensp; 3.2.5. **[Calculation from log model evidences](/P/lfe-lme)** <br>
+   
+   3.3. Bayes factor <br>
+   &emsp;&ensp; 3.3.1. *[Definition](/D/bf)* <br>
+   &emsp;&ensp; 3.3.2. **[Transitivity](/P/bf-trans)** <br>
+   &emsp;&ensp; 3.3.3. **[Computation using Savage-Dickey density ratio](/P/bf-sddr)** <br>
+   &emsp;&ensp; 3.3.4. **[Computation using encompassing prior method](/P/bf-ep)** <br>
+   &emsp;&ensp; 3.3.5. *[Encompassing model](/D/encm)* <br>
+   &emsp;&ensp; 3.3.6. *[Log Bayes factor](/D/lbf)* <br>
+   &emsp;&ensp; 3.3.7. **[Derivation of the LBF](/P/lbf-der)** <br>
+   &emsp;&ensp; 3.3.8. **[Calculation from log model evidences](/P/lbf-lme)** <br>
+   
+   3.4. Posterior model probability <br>
+   &emsp;&ensp; 3.4.1. *[Definition](/D/pmp)* <br>
+   &emsp;&ensp; 3.4.2. **[Derivation](/P/pmp-der)** <br>
+   &emsp;&ensp; 3.4.3. **[Calculation from Bayes factors](/P/pmp-bf)** <br>
+   &emsp;&ensp; 3.4.4. **[Calculation from log Bayes factor](/P/pmp-lbf)** <br>
+   &emsp;&ensp; 3.4.5. **[Calculation from log model evidences](/P/pmp-lme)** <br>
+   
+   3.5. Bayesian model averaging <br>
+   &emsp;&ensp; 3.5.1. *[Definition](/D/bma)* <br>
+   &emsp;&ensp; 3.5.2. **[Derivation](/P/bma-der)** <br>
+   &emsp;&ensp; 3.5.3. **[Calculation from log model evidences](/P/bma-lme)** <br>

P/bf-ep.md

@@ -7,11 +7,11 @@ affiliation: "Tarleton State University"
 e_mail: "faulkenberry@tarleton.edu"
 date: 2020-09-02 12:00:00
 
-title: "Encompassing Prior Method for computing Bayes Factors"
+title: "Encompassing prior method for computing Bayes factors"
 chapter: "Model Selection"
 section: "Bayesian model selection"
 topic: "Bayes factor"
-theorem: "Computation using Encompassing Prior Method"
+theorem: "Computation using encompassing prior method"
 
 sources:
   - authors: "Klugkist, I., Kato, B., and Hoijtink, H."

P/bf-sddr.md

@@ -7,11 +7,11 @@ affiliation: "Tarleton State University"
 e_mail: "faulkenberry@tarleton.edu"
 date: 2020-08-26 12:00:00
 
-title: "Savage-Dickey Density Ratio for computing Bayes Factors"
+title: "Savage-Dickey density ratio for computing Bayes factors"
 chapter: "Model Selection"
 section: "Bayesian model selection"
 topic: "Bayes factor"
-theorem: "Computation using Savage-Dickey Density Ratio"
+theorem: "Computation using Savage-Dickey density ratio"
 
 sources:
   - authors: "Faulkenberry, Thomas J."