Merge pull request #1494 from softmatterlab/eg-TestDistanceBug

Small changes detected in test_braph2

Author: giovannivolpe

braph2genesis/measures/_Distance.gen.m

@@ -40,6 +40,7 @@
 distance = cell(g.layernumber(), 1);
 connectivity_type =  g.getConnectivityType(g.layernumber());
 connectivity_type = diag(connectivity_type);
+Aii_tmp = {};
 for li = 1:g.layernumber()
     Aii_tmp{li} = A{li, li}; %#ok<AGROW>
 end

braph2genesis/measures/_PathLengthAv.gen.m

@@ -60,7 +60,7 @@
     0   0   .1  0
     ];
 
-known_path_length_av = {mean([18/11 18/15 18/15 18/11])};
+known_path_length_av = {harmmean([18/11 18/15 18/15 18/11])};
 
 g = GraphBU('B', A);
 path_length_av = PathLengthAv('G', g).get('M');
@@ -88,8 +88,8 @@
 A = {A11  A22};
 
 known_path_length_av = {
-                       mean([18/11 18/15 18/15 18/11])
-                       mean([18/11 18/15 18/15 18/11])
+                       harmmean([18/11 18/15 18/15 18/11])
+                       harmmean([18/11 18/15 18/15 18/11])
                        };
 
 g = MultiplexBU('B', A);

braph2genesis/pipelines/connectivity-functional multiplex group_average/_AnalyzeGroup_CON_FUN_MP_GA_BUD.gen.m

@@ -42,7 +42,12 @@
 %%% ¡prop!
 DENSITIES (parameter, rvector) is the vector of densities.
 %%%% ¡default!
-0
+[1:1:10]
+%%%% ¡gui!
+pr = PanelPropRVectorSmart('EL', a, 'PROP', AnalyzeGroup_CON_FUN_MP_GA_BUD.DENSITIES, ...
+    'MIN', 0, 'MAX', 100, ...
+    'DEFAULT', AnalyzeGroup_CON_FUN_MP_GA_BUD.getPropDefault('DENSITIES'), ...
+    varargin{:});
 
 %% ¡props_update!
 
@@ -70,6 +75,7 @@
 densities = a.get('DENSITIES'); % this is a vector
 A = cell(1, 2);
 data = cell(1, 2);
+layerlabels = {};
 
 for i = 1:1:gr.get('SUB_DICT').length()
     sub = gr.get('SUB_DICT').getItem(i);
@@ -98,7 +104,6 @@
         data(2) = {data{2} + A_fun};
     end
 
-    layerlabels = {};
     for i = 1:length(densities)
         layerlabels = [...
             layerlabels, ['C ' num2str(densities(i)) '%'], ...