homogeneize files and .tex format with other tutorial

Author: simongravelle

files/tutorial8/mixing.lmp

@@ -11,53 +11,6 @@ bond_style class2
 dihedral_style class2
 improper_style class2
 
-special_bonds lj/coul 0 0 1
 pair_modify tail yes mix sixthpower
+special_bonds lj/coul 0 0 1
 
-read_data CNT.data group CNT &
-  extra/special/per/atom 20
-
-molecule styrene styrene.lmpmol
-
-create_atoms 0 random 200 8305 NULL overlap 2.75 &
-  maxtry 500 mol styrene 7687
-
-minimize 1.0e-4 1.0e-6 100 1000
-
-velocity all create 300.0 4928459 dist gaussian &
-  rot yes loop local
-fix 1 all nvt temp 300 300 100
-
-fix 2 all deform 1 y erate -0.0001 &
-  z erate -0.0001
-variable rho equal density
-fix 3 all halt 10 v_rho > 0.9 error continue
-
-thermo 500
-thermo_style custom step temp pe etotal press &
-  density
-
-run 9000
-
-unfix 2
-unfix 3
-reset_timestep 0
-
-dump mydmp all image 1000 dump.mixing.*.ppm &
-  type type shiny 0.1 box no 0.01 &
-  view 90 0 zoom 1.5 fsaa yes bond atom 0.5
-dump_modify mydmp backcolor white &
-  acolor cp gray acolor c=1 gray &
-  acolor c= gray acolor c1 gray &
-  acolor c2 gray acolor c3 gray &
-  adiam cp 0.3 adiam c=1 0.3 &
-  adiam c= 0.3 adiam c1 0.3 &
-  adiam c2 0.3 adiam c3 0.3 &
-  acolor hc white adiam hc 0.15
-
-run 9999
-
-fix centralize CNT recenter 0 0 0 units box shift all
-run 1
-
-write_data CNT-PS-mix.data