Merge pull request #994 from adilraza99/GH993-fix-contig-shadowing

jonbrenas · web-flow · commit 3b4722f6e787 · 2026-03-02T12:54:37.000Z
Fix contig variable shadowing in H12 overlay plot
diff --git a/malariagen_data/anoph/h12.py b/malariagen_data/anoph/h12.py
@@ -625,7 +625,7 @@ def plot_h12_gwss_multi_overlay_track(
         )
 
         # Plot H12.
-        for i, (cohort_label, (x, h12, contig)) in enumerate(res.items()):
+        for i, (cohort_label, (x, h12, contig_idx)) in enumerate(res.items()):
             fig.scatter(
                 x=x,
                 y=h12,

Original file line number	Diff line number	Diff line change
`@@ -625,7 +625,7 @@ def plot_h12_gwss_multi_overlay_track(`
`625`	`625`	`)`
`626`	`626`
`627`	`627`	`# Plot H12.`
`628`		`- for i, (cohort_label, (x, h12, contig)) in enumerate(res.items()):`
	`628`	`+ for i, (cohort_label, (x, h12, contig_idx)) in enumerate(res.items()):`
`629`	`629`	`fig.scatter(`
`630`	`630`	`x=x,`
`631`	`631`	`y=h12,`