77
88from malariagen_data import af1 as _af1
99from malariagen_data import ag3 as _ag3
10- from malariagen_data import adir1 as _adir1
10+ from malariagen_data import as1 as _as1
11+
1112from malariagen_data .anoph .genome_features import AnophelesGenomeFeaturesData
1213from malariagen_data .util import Region , _resolve_region
1314
@@ -44,13 +45,13 @@ def af1_sim_api(af1_sim_fixture):
4445
4546
4647@pytest .fixture
47- def adir1_sim_api ( adir1_sim_fixture ):
48+ def as1_sim_api ( as1_sim_fixture ):
4849 return AnophelesGenomeFeaturesData (
49- url = adir1_sim_fixture .url ,
50- public_url = adir1_sim_fixture .url ,
51- config_path = _adir1 .CONFIG_PATH ,
52- major_version_number = _adir1 .MAJOR_VERSION_NUMBER ,
53- major_version_path = _adir1 .MAJOR_VERSION_PATH ,
50+ url = as1_sim_fixture .url ,
51+ public_url = as1_sim_fixture .url ,
52+ config_path = _as1 .CONFIG_PATH ,
53+ major_version_number = _as1 .MAJOR_VERSION_NUMBER ,
54+ major_version_path = _as1 .MAJOR_VERSION_PATH ,
5455 pre = False ,
5556 gff_gene_type = "protein_coding_gene" ,
5657 gff_gene_name_attribute = "Note" ,
@@ -70,6 +71,10 @@ def case_adir1_sim(adir1_sim_fixture, adir1_sim_api):
7071 return adir1_sim_fixture , adir1_sim_api
7172
7273
74+ def case_as1_sim (as1_sim_fixture , as1_sim_api ):
75+ return as1_sim_fixture , as1_sim_api
76+
77+
7378gff3_cols = [
7479 "contig" ,
7580 "source" ,
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