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Merge branch 'master' into GH716_add_constructor_params
2 parents bfed3f4 + aaf1a2d commit 78d26d1

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malariagen_data/anoph/dipclust.py

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@@ -44,7 +44,11 @@ def __init__(
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@check_types
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@doc(
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summary="Hierarchically cluster diplotypes in region and produce an interactive plot.",
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summary=""""
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Hierarchically cluster diplotypes in region and produce an interactive plot.
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If you use this function in a publication, please cite the original manuscript: doi.org/10.1093/molbev/msae140
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""",
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)
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def plot_diplotype_clustering(
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self,
@@ -595,7 +599,11 @@ def _insert_dipclust_snp_trace(
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return figures, subplot_heights
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@doc(
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summary="Perform diplotype clustering, annotated with heterozygosity, gene copy number and amino acid variants.",
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summary=""""
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Perform diplotype clustering, annotated with heterozygosity, gene copy number and amino acid variants.
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If you use this function in a publication, please cite the original manuscript: doi.org/10.1093/molbev/msae140
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""",
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parameters=dict(
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heterozygosity="Plot heterozygosity track.",
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snp_transcript="Plot amino acid variants for these transcripts.",

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