Fighting the lint still

jonbrenas · jonbrenas · commit 8de60c389b83 · 2024-10-16T20:05:01.000+01:00
diff --git a/malariagen_data/anoph/hap_freq.py b/malariagen_data/anoph/hap_freq.py
@@ -96,7 +96,7 @@ def haplotypes_frequencies(
         cohorts_iterator = self._progress(
             coh_dict.items(), desc="Compute allele frequencies"
         )
-        hap_track: dict[int, int] = {}
+        hap_track: dict[np.int64, int] = {}
         for coh, loc_coh in cohorts_iterator:
             hap_track = {k: 0 for k in hap_track.keys()}
             n_samples = np.count_nonzero(loc_coh)

Original file line number	Diff line number	Diff line change
`@@ -96,7 +96,7 @@ def haplotypes_frequencies(`
`96`	`96`	`cohorts_iterator = self._progress(`
`97`	`97`	`coh_dict.items(), desc="Compute allele frequencies"`
`98`	`98`	`)`
`99`		`- hap_track: dict[int, int] = {}`
	`99`	`+ hap_track: dict[np.int64, int] = {}`
`100`	`100`	`for coh, loc_coh in cohorts_iterator:`
`101`	`101`	`hap_track = {k: 0 for k in hap_track.keys()}`
`102`	`102`	`n_samples = np.count_nonzero(loc_coh)`