Update numpy to 2.4.1, matplotlib to 3.10.8 and pysqa to 0.3.4 (#891)

* Update environment-integration.yml

* Update environment-mini.yml

* Update environment-mpich.yml

* Update environment-openmpi.yml

* Update environment-win.yml

* Update pyproject.toml

* Update environment-integration.yml

Author: jan-janssen

.ci_support/environment-integration.yml

@@ -4,7 +4,7 @@ dependencies:
 - h5py =3.15.1
 - jupyter
 - mpi4py =4.1.1
-- numpy =2.3.3
+- numpy =2.3.5
 - openmpi
 - papermill
 - atomistics =0.3.4
@@ -15,9 +15,9 @@ dependencies:
 - hatchling =1.28.0
 - hatch-vcs =0.5.0
 - ipython =9.9.0
-- matplotlib =3.10.6
+- matplotlib =3.10.8
 - networkx =3.6.1
 - pygraphviz =1.14
-- pysqa =0.3.3
+- pysqa =0.3.4
 - pyzmq =27.1.0
 - qe =7.5

.ci_support/environment-mini.yml

@@ -2,7 +2,7 @@ channels:
 - conda-forge
 dependencies:
 - python
-- numpy =2.3.3
+- numpy =2.4.1
 - cloudpickle =3.1.0
 - hatchling =1.28.0
 - hatch-vcs =0.5.0

.ci_support/environment-mpich.yml

@@ -2,7 +2,7 @@ channels:
 - conda-forge
 dependencies:
 - python
-- numpy =2.3.3
+- numpy =2.4.1
 - mpich
 - cloudpickle =3.1.2
 - h5py =3.15.1
@@ -12,5 +12,5 @@ dependencies:
 - mpi4py =4.1.1
 - networkx =3.6.1
 - pygraphviz =1.14
-- pysqa =0.3.3
+- pysqa =0.3.4
 - pyzmq =27.1.0

.ci_support/environment-openmpi.yml

@@ -2,7 +2,7 @@ channels:
 - conda-forge
 dependencies:
 - python
-- numpy =2.3.3
+- numpy =2.4.1
 - openmpi
 - cloudpickle =3.1.2
 - h5py =3.15.1
@@ -12,5 +12,5 @@ dependencies:
 - mpi4py =4.1.1
 - networkx =3.6.1
 - pygraphviz =1.14
-- pysqa =0.3.3
+- pysqa =0.3.4
 - pyzmq =27.1.0

.ci_support/environment-win.yml

@@ -2,7 +2,7 @@ channels:
 - conda-forge
 dependencies:
 - python
-- numpy =2.3.3
+- numpy =2.4.1
 - msmpi
 - cloudpickle =3.1.2
 - h5py =3.15.1

pyproject.toml

@@ -52,12 +52,12 @@ graphnotebook = [
 ]
 mpi = ["mpi4py==4.1.1"]
 cluster = [
-    "pysqa==0.3.3",
+    "pysqa==0.3.4",
     "h5py==3.15.1",
 ]
 all = [
     "mpi4py==4.1.1",
-    "pysqa==0.3.3",
+    "pysqa==0.3.4",
     "h5py==3.15.1",
     "pygraphviz==1.14",
     "networkx==3.6.1",