Skip to content

Commit 3965186

Browse files
committed
cleaned some references
1 parent 53c6ea6 commit 3965186

2 files changed

Lines changed: 12 additions & 20 deletions

File tree

journal-article.bib

Lines changed: 9 additions & 17 deletions
Original file line numberDiff line numberDiff line change
@@ -709,23 +709,15 @@ @misc{lammps_github_release
709709
note = {Accessed: 2024-12-26}
710710
}
711711

712-
@article{typelabel_paper,
713-
author = {Gissinger, Jacob R. and Nikiforov, Ilia and Afshar,
714-
Yaser and Waters, Brendon and Choi, Moon-ki and Karls,
715-
Daniel S. and Stukowski, Alexander and Im, Wonpil and
716-
Heinz, Hendrik and Kohlmeyer, Axel and Tadmor, Ellad
717-
B.},
718-
title = {Type Label Framework for Bonded Force Fields in
719-
LAMMPS},
720-
journal = {The Journal of Physical Chemistry B},
721-
volume = {128},
722-
number = {13},
723-
pages = {3282-3297},
724-
year = {2024},
725-
doi = {10.1021/acs.jpcb.3c08419},
726-
note = {PMID: 38506668},
727-
URL = { https://doi.org/10.1021/acs.jpcb.3c08419 },
728-
eprint = { https://doi.org/10.1021/acs.jpcb.3c08419 }
712+
@article{gissinger2024type,
713+
title={Type label framework for bonded force fields in LAMMPS},
714+
author={Gissinger, Jacob R and Nikiforov, Ilia and Afshar, Yaser and Waters, Brendon and Choi, Moon-ki and Karls, Daniel S and Stukowski, Alexander and Im, Wonpil and Heinz, Hendrik and Kohlmeyer, Axel and others},
715+
journal={The Journal of Physical Chemistry B},
716+
volume={128},
717+
number={13},
718+
pages={3282--3297},
719+
year={2024},
720+
publisher={ACS Publications}
729721
}
730722

731723
@article{gissinger2017polymer,

lammps-tutorials.tex

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -278,7 +278,7 @@ \subsection{Scope}
278278
isothermal-isobaric (NPT) ensemble; then, a stretching force is applied
279279
to the polymer. Through this relatively complex solvated polymer
280280
system, the tutorial demonstrates how to use type labels to make
281-
molecule files more generic and easier to manage~\cite{typelabel_paper}.
281+
molecule files more generic and easier to manage~\cite{gissinger2024type}.
282282

283283
In \hyperref[sheared-confined-label]{tutorial 4}, an electrolyte is
284284
confined between two walls, illustrating the specifics of simulating
@@ -1366,7 +1366,7 @@ \subsubsection{Unbreakable bonds}
13661366
us to conveniently reuse the parameter settings
13671367
in other inputs or switch them with others. This will become more general
13681368
when using type labels, which is shown in the next
1369-
tutorial~\cite{typelabel_paper}.
1369+
tutorial~\cite{gissinger2024type}.
13701370
\end{note}
13711371

13721372
\paragraph{Prepare the initial state}
@@ -1859,7 +1859,7 @@ \subsubsection{Preparing the water reservoir}
18591859
\end{lstlisting}
18601860

18611861
\begin{note}
1862-
This tutorial uses type labels~\cite{typelabel_paper} to map each
1862+
This tutorial uses type labels~\cite{gissinger2024type} to map each
18631863
numeric atom type to a string (see the \flecmd{parameters.inc} file):
18641864
\lmpcmdnote{labelmap atom 1 OE 2 C 3 HC 4 H 5 CPos 6 OAlc 7 OW 8 HW}
18651865
Therefore, the oxygen and hydrogen atoms of water (respectively types

0 commit comments

Comments
 (0)