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Add PBS genome-wide scan#1299

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31puneet wants to merge 2 commits intomalariagen:masterfrom
31puneet:feature/issue-293-pbs-gwss
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Add PBS genome-wide scan#1299
31puneet wants to merge 2 commits intomalariagen:masterfrom
31puneet:feature/issue-293-pbs-gwss

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@31puneet 31puneet commented Apr 15, 2026

This PR would resolve #293

  • Implements pbs_gwss(), plot_pbs_gwss_track(), and plot_pbs_gwss() with normed parameter support
  • Here is an example notebook to see how the methods work link.

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codecov Bot commented Apr 15, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 88.97%. Comparing base (c2c4f73) to head (6f5a9ea).
⚠️ Report is 53 commits behind head on master.

Additional details and impacted files
@@            Coverage Diff             @@
##           master    #1299      +/-   ##
==========================================
+ Coverage   88.92%   88.97%   +0.04%     
==========================================
  Files          55       58       +3     
  Lines        6257     6503     +246     
==========================================
+ Hits         5564     5786     +222     
- Misses        693      717      +24     

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@31puneet
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Hi @jonbrenas, @tristanpwdennis PTAL

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Implement Population Branch statistic (PBS)

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